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Further reading □ OverviewIssue 1: December 1986Issue 2: January 1987Issue 3: April 1987Issue 4: June 1987Issue 5: August 1987Issue 6: October 1987Issue 7: December 1987Issue 8: February 1988Issue 9: April 1988Issue 10: June 1988Issue 11: August 1988Issue 12: October 1988Issue 13: December 1988Index of issues
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CCDLiteratureNewslettersARCLIGHT
CCDLiteratureNewslettersARCLIGHT
ACL ACD C&A INF CCD CISD Archives
Further reading

Overview
Issue 1: December 1986
Issue 2: January 1987
Issue 3: April 1987
Issue 4: June 1987
Issue 5: August 1987
Issue 6: October 1987
Issue 7: December 1987
Issue 8: February 1988
Issue 9: April 1988
Issue 10: June 1988
Issue 11: August 1988
Issue 12: October 1988
Issue 13: December 1988
Index of issues

Issue 4: June 1987

Inauguration of the Cray X-MP/48 Computer

On 15 April 1987, the Right Honourable Kenneth Baker MP, the Secretary of State for Education and Science, came to the Rutherford Appleton Laboratory and inaugurated the Cray X-MP/48 computer. At the ceremony, he was welcomed to the Joint Research Councils' Supercomputer Unit by the Chairman of SERC, Professor E W Mitchell FRS, who stressed that the computer was being run by SERC on behalf of all the Research Councils. Professor Sir David Phillips FRS, the chairman of the Advisory Board for Research Councils outlined the way in which the provision of the Cray computer had come about and of the compelling arguments advanced by Professor Forty in the report of the working party commissioned by the ABRC, the UGC, and the Computer Board. Mr Baker spoke of the importance attached by Government to the provision of advanced facilities for research. He mentioned his pleasure in meeting Professor Forty for the first time. After the ceremony, a buffet lunch was provided for the guests by the courtesy of Cray Research (UK) Ltd.

Bart Fossey, Central Computing Department, Rutherford Appleton Laboratory

Collaborative Computational Projects

Collaborative Computational Projects

In 1974 the SERC Science Board agreed to fund the first of a number of Collaborative Computational Projects. It dealt with Electron Correlations in Atoms and Molecules. Since that time, other projects have been set up in different areas of science. The current ones are supported in the main by the Science Board of SERC through Daresbury Laboratory. One, however, has support from the Astronomy and Planetary Science Board.

Large scale computation is now a well established feature of research in many branches of science. It is often complementary to traditional theory and experiment. It can be an essential component in the interpretation and understanding of experiments conducted on major facilities, such as those used by scientists supported by SERC. Examples of these include the Synchrotron Radiation Source and the Nuclear Structure Facility at Daresbury Laboratory; the Spallation Neutron Source ISIS and the Laser Facility at the Rutherford Appleton Laboratory; the various telescopes installed in Australia. Hawaii, and the Canary Islands; and particle accelerators at CERN in Geneva and at DESY in Hamburg.

The projects bring together people in universities and other research centres to formulate initiatives to collect and develop program codes which will have a significant impact upon research in their areas. In the past the codes have been adapted to run efficiently on supercomputing facilities like the Cray 1-S computer. With the introduction of the Cray X-MP/48 computer, the CCPs have turned their attention to exploiting its special features on these and other newer codes. The secretaries of the CCPs have been invited to give an indication of progress and plans for the transfer of relevant computer programs. We are grateful for their response since this gives a useful insight into aspects of the scientific importance of the Cray X-MP supercomputing facility.

CCP1 - Electronic Structure of Molecules.

The principal codes supported by CCP1 (GAMESS, CADPAC, and ATMOL) will be implemented on the RAL CRAY X-MP in three steps.

  1. As available at ULCC on the CRAY-1 systems there. This phase is now complete.
  2. A second implementation bringing the codes to the standard of their most recently released versions (e.g. the FPS-164 and CDC Cyber-205 versions of GAMESS and ATMOL respectively) is now well underway.
  3. It is expected that numerous further developments will then take place, to further enhance our capability, such as:
    1. The use of Multi-Tasking, which would appear to be mandatory for our largest jobs, which will require in excess of 6 Mword of memory.
    2. Improved Disk input/output system, arranged by very large transfer unit (say 64 Kword minimum) so that a 'striped' disk configuration can be driven efficiently.
    3. Further vectorization of the codes, in which we expect the hardware availability of the gather/scatter and index-vector compress functions to be of prime importance.

Contact Roger Amos (Chemistry Dept., Cambridge. RDA1 at RL.IB) regarding CADPAC, Martyn Guest or Bob Harrison (MFC or RJH1 at RL.IB) at Daresbury regarding GAMESS, or Vic Saunders (VRS at RL.IB) also at Daresbury regarding ATMOL.

For the longer term, the project is aiming at making good quality Hartree-Fock calculations routinely available (i.e. costing say less than 1 hour cpu time) for very large molecules, consisting of 100-400 atoms. To achieve this goal will require much development of the theory, since existing theoretical methods will not deliver the goods even on a machine as powerful as the CRAY X-MP/48. However, if machines of this power were not available there would be little chance that such a project could reach its aims.

Dr M F Guest, Daresbury Laboratory

CCP2 - Continuum States of Atoms and Molecules.

CCP2 has already implemented a number of its major codes on the X-MP, while others are being converted to run on this machine.

Two sets of atomic R-matrix codes have been in-Stalled. These are the 'Opacity' R-matrix program and the Breit-Pauli codes.

The 'Opacity' package consists of modelled versions of the RMATRX program (CPC vol. 4, p. 367 (1978)) together with new asymptotic codes due to Prof. M. J. Seaton (University College, London) for calculating electron collision strengths, energy levels, bound-bound and bound-free data required for the Opacity project. This package will be used at Queens University (Belfast), University College (London) and Royal Holloway and Bedford New College. Trial runs have begun on the iso-electronic lithium, beryllium and carbon ions. The same codes are also being used to investigate the coupling of highly excited states and pseudo-states in electron-atom scattering.

The Breit-Pauli package is a modified version of that published in CPC Vol. 25, p. 347 (1982). and trial runs have begun on the neon-like ions of iron and selenium.

Contact Dr Keith Berrington at QUB for further information on the atomic R-matrix codes.

The molecular R-matrix codes describing the scattering of electrons by diatomic molecules are in the process of being ported to the X-MP and at the present time most modules are working correctly. This package has been developed from the ALCHEMY quantum chemistry program and is being used to study photoionization, dissociative recombination and other processes as well as electronic and vibrational excitation. Contact Cliff Noble (CJN at RL.IB) at Daresbury Laboratory regarding the diatomic molecule codes.

Dr W Eissner, Queen's University Belfast

CCP3 - Surface Science

CCP3 is concerned with providing theoretical / computational support in the area of surface science. The CCP3 library contains a number of widely used codes which are currently being mounted on the X-MP at RAL. These include:

  1. CAVATN. A program to calculate the angle and energy dependent Low Energy Electron Diffraction (LEED) intensities for systems with an arbitrary number of atoms in the layer unit cell, and an arbitrary layer stacking sequence, using the layer KKR multiple scattering method.
  2. ICXANES. A program to calculate X-ray absorption edges for a cluster of atoms using a real space KKR approach and various levels of approximation to multiple scattering.
  3. NEWPOOLN. A program to calculate angle resolved photoemission currents from crystal surfaces with an arbitrary number of coplanar atoms in the layer unit cell using LEED type computational methods.

The programs listed above model experimental probes of the geometry and electronic structure of surfaces and are routinely used to interpret experimental data.

The other main area of interest within CCP3 is in self consistent field calculations of the electronic structure of surfaces. Several groups are in the process of developing codes using a variety of basis sets and multiple scattering methods. These programs are quickly outstripping available computing resources at other centres, so that in the medium term it is planned to mount and further develop them on the RAL X-MP and thus make them available to a wider community.

In the longer term, we plan to develop codes to attack the chemisorption problem, that is, to determine the electronic structure of a cluster of atoms adsorbed on a surface. This is an ambitious project, which requires as a starting point the computational facilities afforded by the X-MP.

For further information contact Richard Blake at Daresbury (RJB2 at RL.IB).

Mr R J Blake, Daresbury Laboratory

CCP5 - Computer Simulation of Condensed Matter

This project is concerned with the computer simulation of condensed matter, both fluid and solid. Both dynamic (Monte Carlo and Molecular Dynamics) and static (energy minimization with respect to system geometry) techniques are used.

  1. Dynamic Codes. Three programs from the CCP5 library (ADMIXT, MDMPOL and MDMIXT) have been implemented so far. It is proposed to develop a path integral Monte Carlo program in the near future, and to implement the remainder of the CCP5 library as warranted by demand. Contact Bill Smith at Daresbury Laboratory (WS at RL.IB) for more information.
  2. Static codes. CASCADE and THBREL (which minimize the energy of defective and perfect solids respectively) have both been implemented. Whilst CASCADE is well vectorized. THBREL is not, and work is underway to remedy this deficiency. Both programs need to invert a large matrix, which can under certain circumstances become sufficiently close to singularity as to cause the Cray supplied routine MINV to fail. Alternative methods (including the use of double precision) are being investigated. Contact Maurice Leslie (ML at RL.IB) at Daresbury for further information.
Dr M Leslie, Daresbury Laboratory

CCP6 - Heavy Particle Collisions

CCP6 is concerned with the theory of atom/atom, atom/molecule and molecule/molecule collisions. Classical, semi-classical and quantal methods are used. In the near future it is hoped to implement the most recent version of MOLSCAT on the X-MP. For information on the progress of this work contact Jeremy Hutson (Chemistry Dept., Durham or JMH2 at RL.IB).

Robert Allen (Daresbury Laboratory) is planning to implement the modified versions of ATMOL and MRD-CI on the X-MP, to allow calculations on charge exchange reactions to be carried out. Contact RJA at RL.IB for further information.

Dr R Allen, Daresbury Laboratory

CCP7 - Analysis of Astronomical Spectra

Collaborative Computational Project No. 7 (CCP7) is concerned with the analysis of stellar, nebular and interstellar spectra. As well as implementing existing programs for modelling astronomical objects, CCP7 is concerned with incorporating improved atomic data and algorithms into those programs whenever possible. Users of CCP7 implemented programs have traditionally used File Transfer Protocol to transfer their predictions to a local STARLINK VAX for direct comparison with observation.

Now that "red-book" Job Transfer and Manipulation Protocol (JTMP) is available for the submission of batch work to remote machines, it seems desirable to develop VAX/VMS command procedures for running CCP7 implemented programs on a chosen CRAY (XMP, COS1M or COS2M) directly without having to separately initiate file transfers for input and output. It is hoped that the successful development of VAX/VMS procedures using JTMP, will remove the need for STARLINK users to have a working knowledge of the front-end machine operating system and the connecting network. The peer review committee might allocate time on any of the three CRAYs at its disposal to a prospective grant holder wishing to use CCP7 implemented programs; indeed he might be moved from one CRAY to another, and he would only need to change the value of the CRAY parameter in his VAX/VMS procedure to make the change. Work is currently in hand to develop VAX/VMS command procedures to simplify CRAY batch job submission following the guide-lines described above.

Most CCP7 use of CRAY computers has been for calculating model stellar atmospheres and line formation, without assuming Local Thermodynamic Equilibrium (LTE). When LTE is not assumed (ie. non-LTE is adopted), the statistical equilibrium equations have to be solved simultaneously with the radiative transfer equation to yield ionisation fractions, level populations and the radiation field. Non-LTE calculations are clearly made more realistic by increasing the complexity of model atoms considered, this is especially true for line formation computations. The large additional memory available on the CRAY-XMP/48 is therefore advantageous to non-LTE calculations, and non-LTE codes will therefore be implemented on the CRAY-XMP/48 as soon as possible.

Dr A E Lynas-Gray, University College London

CCP9 - Electronic Structure of Solids

CCP9 envisages that the increased memory (to close to 8 Mwords) will be most beneficial to its work. All the electronic structure codes will be able to deal with more complicated structures, and more accurately, than was previously possible. Examples of potential new applications are:

  1. The study of long and short range order in alloys.
  2. Susceptibility calculations for the rare earth metals.
  3. The electronic structure of semi-conductor super-lattices and heterostructures.
  4. The calculation of antiphase boundary energies.

The recently renewed CCP9 band theory project. based on the relativistic and spin-polarized KKR method (with full spatial dependence of the potential) counts on the availability of the memory and speed of the X-MP for its production work. Contact Walter Temmerman at Daresbury Laboratory (WMT at RL.IB) with queries regarding CCP9s activities on the X-MP.

Dr W Temmerman, Daresbury Laboratory
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